Deborah.Elijah

Deborah.Elijah — Module

module Elijah

Deborah.Elijah — Interactive wizards for Deborah.DeborahCore / Deborah.Esther / Deborah.Miriam (and Threads variants).

Deborah.Elijah provides REPL-based interactive wizards that generate TOML configuration files for the Deborah.jl ecosystem:

Deborah.DeborahCore (ML-based trace estimation with bias correction),
Deborah.Esther (cumulant analysis for single ensemble),
Deborah.Miriam (multi-ensemble reweighting/interpolation),

plus their Threads batch/parallel runners.

Each wizard guides you through required fields, validates inputs, optionally loads an abbreviation map, and writes a ready-to-run config_*.toml.

Scope & Responsibilities

Guided config authoring: prompt for paths, features/targets, indices, model tags, and statistical settings (bootstrap/jackknife).
Ecosystem coverage:
- DeborahWizardRunner.run_DeborahWizard → config_Deborah.toml (single-job).
- EstherWizardRunner.run_EstherWizard → config_Esther.toml ($\text{Tr} \, M^{-n} \; (n=1,2,3,4)$).
- MiriamWizardRunner.run_MiriamWizard → config_Miriam.toml (multi-$\kappa$, solver/trajectory).
- DeborahThreadsWizardRunner.run_DeborahThreadsWizard → config_DeborahThreads.toml (labels$\times$trains grid).
- EstherThreadsWizardRunner.run_EstherThreadsWizard → config_EstherThreads.toml ($\text{Tr} \, M^{-n} \; (n=1,2,3,4)$ across labels$\times$trains).
- MiriamThreadsWizardRunner.run_MiriamThreadsWizard → config_MiriamThreads.toml (multi-$\kappa$ $\times$ labels$\times$trains with solver/trajectory).
Abbreviation support: inline or external TOML, used to encode feature/target names and to derive compact path/name suffixes.
REPL UX: clear prompts, defaults, and immediate file emission.

Public API

Minimal Usage (REPL)

julia> using Deborah

# Single-job configs
julia> run_DeborahWizard()
julia> run_EstherWizard()
julia> run_MiriamWizard()

# Threaded/batch configs
julia> run_DeborahThreadsWizard()
julia> run_EstherThreadsWizard()
julia> run_MiriamThreadsWizard()

Notes

Wizards persist exactly the sections expected by downstream runners (e.g., [data], [bootstrap], [jackknife], and where applicable [input_meta], [deborah], [solver], [trajectory]).
Ensemble names for Deborah.Esther/Deborah.Miriam variants are derived from lattice metadata (e.g., ns, nt, beta, kappa) to keep paths reproducible.
All column indices are $1$-based to match typical data files.

source